As DNA sequencing technologies improve, it is becoming easier to sequence and assemble new genomes from non-model organisms. However, before a newly assembled genome sequence can be used as a ...

Imagine looking through a magnifying glass into a bustling city filled with millions of tiny organisms, each playing a unique role in shaping their environment. This is what metagenomics is all about ...

Targeted metagenomics is a molecular biology approach used to selectively analyze specific microbial communities within a complex mixture of microorganisms, such as those found in environmental ...

10x genomics 为人类和小鼠提供了预先构建好的参考基因组，以便与Cell Ranger一起使用。研究人员可以为其他物种制作定制的参考基因组，或者将感兴趣的定制标记基因添加到参考中，例如GFP。以下教程概述了使用cellranger mkref 命令构建自定义参考基因组引用的步骤。

We will demonstrate an example run of DIAMOND on a small dataset here. For this, we assume the tool has been installed according to the installation instructions ...

Computational methods are key in microbiome research, and obtaining a quantitative and unbiased performance estimate is important for method developers and applied researchers. For meaningful ...

Article Views are the COUNTER-compliant sum of full text article downloads since November 2008 (both PDF and HTML) across all institutions and individuals. These metrics are regularly updated to ...

If you're not in the above directory, then relocate yourself to it. Now, create a Trinotate/ directory and relocate to it. We'll use this as our Trinotate computation workspace. TransDecoder is a tool ...

Mass spectrometry coupled to liquid chromatography (LC–MS and LC–MS/MS) is commonly used to analyze the protein content of biological samples in large scale studies, enabling quantitation and ...