Spatial clustering (or spatial domain identification) determines cellular niches characterized by specific admixing of these populations. It assigns cells to clusters based on both their intrinsic ...

Squidpy is the scverse toolkit for scalable analysis and visualization of spatial molecular data. It builds on scanpy and anndata, providing streamlined APIs for feature extraction, spatial statistics ...

There are three main goals in the course "In silico study of genome regulation": 1) Overview of genome regulation in biomedical research (e.g., molecular biology of protein-DNA interactions, histone ...

This multi-omics study demonstrates that specific microbial community structures and their metabolic activities are core factors driving regional flavor differences in Guizhou traditional fermented ...

Contributed by Howard Y. Chang; received November 19, 2024; accepted February 20, 2025; reviewed by Jellert Gaublomme and David A. Quigley The spatial organization of cells within tissues plays a ...

J. Doenier et al., Plasmid pJD28.pUC19_diaCas9_GFP_2A_shBla. NCBI GenBank. https://www.ncbi.nlm.nih.gov/nuccore/PV959482. Deposited 21 July 2025.