Unlike single sequence, primer design on multiple sequences needs data quality filtering, multiple sequence alignment, conservative region identification, primer design for multiple templates, and ...

The purpose of swarm is to provide a novel clustering algorithm that handles massive sets of amplicons. Results of traditional clustering algorithms are strongly input-order dependent, and rely on an ...

One of the challenges presented by the new sequencing technology is the so-called 'read mapping' problem. Sequencing machines made by Illumina of San Diego, Applied Biosystems (ABI) of Carlsbad, ...

Edited by Melanie Cobb, The University of Texas Southwestern Medical Center, Dallas, TX; received March 15, 2024; accepted December 6, 2024 ...

hDepartment of Microbiology and Immunology, University of Nevada, Reno School of Medicine, Reno, NV, USA ...